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Just wanted to chime in with my 2 cents worth about the smell and the litter habits. Sable was always pretty good about using his litter box until he hit puberty and started marking territory around the living room. At that time his pee also started to smell stronger.
Once he was neutered he went back to his good litter habits and we haven't had any problem with odor. I still call him "Stinker" but it's only out of habit.
Vinegar does work great for cleanup. For litter we use a combination of a layer of Mewsprint (store brand Yesterday's News from PetValu) which has baking soda in it and a layer of Carefresh on top for softness. While he occasionally leaves a poop outside the litterbox but still inside his pen he is very reliable with going to the box to pee.